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Associate Computational Scientist
Computational biologist at Icahn School of Medicine at Mount Sinai identifying Alzheimer’s and Lewy body dementia risk genes and pathways.
United StatesAssociate Computational Scientist at Icahn School of Medicine at Mount Sinai
Lead the genomic and multi-omic center for DIAN, an international longitudinal study of dominantly inherited Alzheimer's disease, integrating WES, WGS, and genotype array data. Architect and maintain reproducible, containerized Snakemake pipelines for variant calling, QC, and analysis.
WESWGSVariant CallingQuality Control (QC)SnakeMakePythonRBASHSingularityDRAGENBcftoolsPLINKKingTOPMed ImputationGnomADIGVUCSC
Pursued a Master of Science in Bioengineering with a focus on Biocomputations and Data Analytics.
Completed a Bachelor of Science in Biocomputational Engineering and the Politics of Health with Honors, including participation in the IDEAS Honors Program and Dean's List recognition.
Implemented CHARMM GUI to build molecular dynamics simulations of bacterial membrane systems and analyzed membrane properties. Independently analyzed outer membranes of pathogenic gram-negative bacteria to differentiate immune responses based on lipopolysaccharide structures.
Molecular DynamicsCHARMMMembrane ModelingData AnalysisPythonR
Analyzed solvent accessible surface area of amino acid residues to determine effect of microenvironment on orientation. Enhanced Rosetta Software Suite's protein structure prediction by implementing weighted hydrophobicity attribute into scoring algorithm.
RosettaProtein Structure PredictionRMSD AnalysisPythonHydrophobicity Analysis
Profile sourced from Himalayas.